CDS

Accession Number TCMCG007C01044
gbkey CDS
Protein Id XP_018511117.2
Location complement(join(6316226..6317248,6317351..6317546,6317617..6317798,6317931..6318057,6318145..6318146))
Gene LOC103843869
GeneID 103843869
Organism Brassica rapa

Protein

Length 509aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018655601.2
Definition autophagy-related protein 16 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description Autophagy protein 16 (ATG16)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17890        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
ko04621        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
map04621        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000421        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005776        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006907        [VIEW IN EMBL-EBI]
GO:0006909        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019776        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030587        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031154        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034274        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051703        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090382        [VIEW IN EMBL-EBI]
GO:0090702        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099120        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCACAGGAGGAGAAAGCAATGGAAGCCATAAAAGACGCTTTGAGAGCTTTGCGGCAGCGCCATCTTCTCGAAGAAGGAGCTCATGGCCCCGCCATTTCTGCGCTCTCTAAACCTATGATTTCTCAGGGATCTGAATGGAAGGAGAAAACAGAAAAGCTGGAGATAGAGCTACAGCAATGTTACAAAGCGCAATCCCGATTGTCTGAACAACTCGTGATAGAAGTAGCTGAATCCAGAACTTCAAAGTCTTCTTTACAAGACAAGGAGTTGTTGATTCTTGGCCTCGACAAGGACTTATCCCAAACAAGGGAGGAGTGTACACGGTTACAACAAGAGTTAGAGGAAAAGACCAAGACGCTTGATTTACTTATTACTGAAAACAAGGAAGTCAGATCTCAGCTGGAGGTGATGACTAACAGAGCTCAAAAAGCAGAGTCTGAGAACAAAATGTTAATTGATCGGTGGATGTTACAGAAGATGCAGGATGCGGAACGTCTTAATGAGGCAAATGCTCTCTATGAAGAAATGCTAGCTAAGCTTAAGGCCAATGGTTTGGAAAATCTTGCTAGGCAGCAAGTTGATGGAATTGTCCGACGCAATGAAGATGGAACTGATCATTTTGTTGAGTCTACCATCCCGTCAACATGTGGCCACCGTATCCATGCTCACGAAGGTGGCTGTGGTTCGATACTCTTTGAATACAGCTCTCGTACTCTGTTTACCGGTGGGCAAGCCGGACCAGTAAAAATGTGGGACACCAATAGTGGGTCTCTAATCAAAAGCTTAAACGGTTCCCTTGGGAATATACTTGATCTAGCCATAACCCACGACAATAAGTCCCTGATCGCAGCAAGCAGCTCTAACAATTTGTTTGTGTGGGACGTTAACTCTGGTAGGGTACGTCATACTCTCACAGGCCACACAGATAAAGTATGTGCTGTGGATGTGAGCAAGTTCTCCAGCCGACATGTTGTCAGTGCAGCTTATGACCGTACTATTAAACTCTGGGATTTGCAGAAAGGTTACTGTACAAACACAGTGCTCTTTACCAGTAACTGCAATGCGATCTGCCTAAGCATAGACGGGCTTACGGTATTCTCAGGCCACATGGATGGGAATCTTAGGTTGTGGGATATTCAAACTGCGAAACTTCTGTCTGAAGTAGCTGGGCATTCTTCTGCTGTAACCTCTGTATCATTGTCCCGGAATGGAAATATGATCTTGACGAGCGGGAGAGACAACGTACATAATGTATTCGATACACGGACTTTGGAAATTTGCGGGACGTTGAGAGCATCAGGGAACAGATTGGCGTCGAATTGGAGCCGGTCGTGTATAAGTCCAGATGATGAATACGTGGCTGCGGGATCTTCGGATGGAACGGTGCATGTCTGGTCTATCTCCAAAGGCAGTATAGTGAGCACTCTCAAGGAGCAAACATCTCCTATACTGTGTTGTTCTTGGAGTGGGATCGGGAAACCATTGGCATCGGCTGATAAAAACGGGTATGTCTGTACTTGGACATGA
Protein:  
MSQEEKAMEAIKDALRALRQRHLLEEGAHGPAISALSKPMISQGSEWKEKTEKLEIELQQCYKAQSRLSEQLVIEVAESRTSKSSLQDKELLILGLDKDLSQTREECTRLQQELEEKTKTLDLLITENKEVRSQLEVMTNRAQKAESENKMLIDRWMLQKMQDAERLNEANALYEEMLAKLKANGLENLARQQVDGIVRRNEDGTDHFVESTIPSTCGHRIHAHEGGCGSILFEYSSRTLFTGGQAGPVKMWDTNSGSLIKSLNGSLGNILDLAITHDNKSLIAASSSNNLFVWDVNSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLQKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTAKLLSEVAGHSSAVTSVSLSRNGNMILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDEYVAAGSSDGTVHVWSISKGSIVSTLKEQTSPILCCSWSGIGKPLASADKNGYVCTWT